autodock-vina software package provides docking of small molecules to proteins, you can install in your Debian 8 (Jessie) by running the commands given below on the terminal,
$ sudo apt-get update $ sudo apt-get install autodock-vina
autodock-vina is installed in your system.
Make ensure the autodock-vina package were installed using the commands given below,
$ sudo dpkg-query -l | grep autodock-vina *
You will get with autodock-vina package name, version, architecture and description in a table
| Distro | Debian 8 jessie |
| Section | Science |
| Package | autodock-vina |
| Version | 1.1.2-3+b1 [amd64, armel, armh |
| Description | docking of small molecules to proteins |
| Sub Section | Science |
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